Having flasher from the old lorrance green box to some of the newer ones I have seen allot of different problem related to battery but that does not sound familiar. Most of the time it a dimmer screen, flash slows, IR stops working, or if you have an older one with a alarm it will start going off. In the past if any my flash start to act up when I first put the transducer in the water a coating of ice cover the bottom this mess up the signal. Just pull it up and warm it with hand till the ice is gone. But in the pass I replace more transducers than box problems.
Good Luck